Statistical models for quantitative traits analysis

We aim to make all the software developed during our research available. If more than one release is available, usually the most recent one is an extended version (with more functionality), and the older one guarantees full reproducibility of the results reported in the paper.

Here's a list of the available software/data:

  • PANAMA. (Probabilistic ANAlysis of genoMic dAta), a novel probabilistic model to account for confounding factors in eQTL studies.

    N. Fusi, O. Stegle and N. D. Lawrence, "Joint modelling of confounding factors and prominent genetic regulators provides increased accuracy in genetical genomics studies", PLoS Computational Biology, in press.

    [Software and data]